PubMed abstracts bulk download - JSON, CSV or Excel

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NeverEmpty

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PubMed Scraper - Articles, Abstracts, Authors & MeSH

Download PubMed articles in bulk as flat rows from NCBI's official E-utilities API: title, full abstract with its section labels, authors with affiliations, journal, DOI, PMC ID and MeSH terms. This example pulls machine learning articles published from 2025 on, newest first.

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PubMed Scraper - Articles, Abstracts, Authors & MeSHneverempty/pubmed-scraper

PMID

Title

First author

Journal

+6 fields

Input

Search query:machine learning

From date:2025

Which date:publication

Order:pub_date

Maximum articles:500

Attempts per request:4

Output fields

PMID

Title

First author

Journal

Published

DOI

PMC ID

Retracted

Status

PubMed

How it works

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The PubMed Scraper - Articles, Abstracts, Authors & MeSH Actor is ready to run with the inputs already set for "PubMed abstracts bulk download - JSON, CSV or Excel". Sign up or log in and you'll land in Apify Console with a copy of this exact task.

Start the "PubMed abstracts bulk download - JSON, CSV or Excel" task

The PubMed Scraper - Articles, Abstracts, Authors & MeSH Actor will start running based on the input automatically. You can also change all the input fields, like search query, from date, and more, to match your specific use case.

Receive the "PubMed abstracts bulk download - JSON, CSV or Excel" output

Monitor the progress in real time. You will be notified as soon as your dataset is complete and ready for review. Each result includes data such as PMID, title, first author, and more.

Integrate into your workflow

The final output is delivered in JSON, CSV, or Excel format, ready to be plugged into your workflow. You can also run the "PubMed abstracts bulk download - JSON, CSV or Excel" task via API.