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UniProt Protein Sequence Scraper

Extract reviewed human proteins from UniProt including full amino acid sequences as structured data for analysis.

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UniProt Protein Sequence & Annotation Scraper
UniProt Protein Sequence & Annotation Scraperparseforge/uniprot-scraper
Primary Accession
Uni Protkb Id
Entry Type
Protein Name
+10 fields
Text
Number
Boolean
List
Object

Input

Search term for proteins:reviewed:true AND organism_id:9606
Maximum proteins:5
Include Sequence String:true
Page Size:500

Output fields

Primary Accession
Uni Protkb Id
Entry Type
Protein Name
Organism Scientific
Organism Common
Taxon Id
Protein Existence
Annotation Score
Sequence Length
Sequence Mol Weight
Sequence Crc64
Sequence Md5
Reference Count

How it works

Sign up on Apify or log in

The UniProt Protein Sequence & Annotation Scraper Actor is ready to run with the inputs already set for "UniProt Protein Sequence Scraper". Sign up or log in and you'll land in Apify Console with a copy of this exact task.

Start the "UniProt Protein Sequence Scraper" task

The UniProt Protein Sequence & Annotation Scraper Actor will start running based on the input automatically. You can also change all the input fields, like search term for proteins, maximum proteins, and more, to match your specific use case.

Receive the "UniProt Protein Sequence Scraper" output

Monitor the progress in real time. You will be notified as soon as your dataset is complete and ready for review. Each result includes data such as primary accession, uni protkb id, entry type, and more.

Integrate into your workflow

The final output is delivered in JSON, CSV, or Excel format, ready to be plugged into your workflow. You can also run the "UniProt Protein Sequence Scraper" task via API.

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Integrate "UniProt Protein Sequence Scraper" into your workflow

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