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Search cryo-EM maps by keyword (EMDB)

Type a keyword such as 'adhesion GPCR' and get every matching Electron Microscopy Data Bank entry as one clean row: title, method, resolution, sample, fitted PDB models, authors, dates and link. Filter by best resolution (here: 4 Å or better). Export to CSV/Excel or call via API. Uses the official EMDB API.

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EMDB Cryo-EM Map Lookup
EMDB Cryo-EM Map Lookupresearchdata/emdb-cryoem-lookup
emdbId
title
method
resolutionA
+2 fields
Text
Number
Boolean
List
Object

Input

EMDB IDs:EMD-11103
Search query:adhesion GPCR
Max resolution (Å):4
Max results from search:25

Output fields

emdbId
title
method
resolutionA
fittedPdbIds
url

How it works

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The EMDB Cryo-EM Map Lookup Actor is ready to run with the inputs already set for "Search cryo-EM maps by keyword (EMDB)". Sign up or log in and you'll land in Apify Console with a copy of this exact task.

Start the "Search cryo-EM maps by keyword (EMDB)" task

The EMDB Cryo-EM Map Lookup Actor will start running based on the input automatically. You can also change all the input fields, like EMDB IDs, search query, and more, to match your specific use case.

Receive the "Search cryo-EM maps by keyword (EMDB)" output

Monitor the progress in real time. You will be notified as soon as your dataset is complete and ready for review. Each result includes data such as emdbid, title, method, and more.

Integrate into your workflow

The final output is delivered in JSON, CSV, or Excel format, ready to be plugged into your workflow. You can also run the "Search cryo-EM maps by keyword (EMDB)" task via API.

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