NCI GDC File Metadata Scraper
Pricing
from $29.62 / 1,000 results
Pull file-level metadata from the NCI Genomic Data Commons public API. Retrieve file IDs, file names, file sizes, MD5 checksums, data types, experimental strategies, and associated case IDs. Ideal for researchers and bioinformaticians building curated datasets for cancer genomics analysis.
You can access the NCI GDC File Metadata Scraper programmatically from your own applications by using the Apify API. You can also choose the language preference from below. To use the Apify API, youโll need an Apify account and your API token, found in API & Integrations in Apify Console.
1from apify_client import ApifyClient2
3# Initialize the ApifyClient with your Apify API token4# Replace '<YOUR_API_TOKEN>' with your token.5client = ApifyClient("<YOUR_API_TOKEN>")6
7# Prepare the Actor input8run_input = {9 "maxItems": 10,10 "dataTypeFilter": [],11 "dataFormatFilter": [],12}13
14# Run the Actor and wait for it to finish15run = client.actor("acquistion-automation/nci-gdc-file-metadata-scraper").call(run_input=run_input)16
17# Fetch and print Actor results from the run's dataset (if there are any)18print(f"๐พ Check your data here: https://console.apify.com/storage/datasets/{run.default_dataset_id}")19for item in client.dataset(run.default_dataset_id).iterate_items():20 print(item)21
22# ๐ Want to learn more ๐? Go to โ https://docs.apify.com/api/client/python/docs/quick-startThe Apify API client for Python is the official library that allows you to use NCI GDC File Metadata Scraper API in Python, providing convenience functions and automatic retries on errors.
Install the apify-client
$pip install apify-clientOther API clients include: