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Europe PMC Scraper

Try for free

Scrape Europe PMC, 42M+ biomedical literature records including PubMed, PubMed Central, patents, and preprints. Search publications, get article details by PMID or DOI, and retrieve citation/reference lists.

Pricing

from $3.00 / 1,000 results

Rating

5.0

(11)

Developer

Crawler Gang

Actor stats

Bookmarked

Total users

Monthly active users

4 days ago

Last modified

Categories

Developer tools

Automation

Other

You can access the Europe PMC Scraper programmatically from your own applications by using the Apify API. You can also choose the language preference from below. To use the Apify API, you’ll need an Apify account and your API token, found in Integrations settings in Apify Console.

Python

JavaScript

CLI

OpenAPI

HTTP

MCP

1from apify_client import ApifyClient
2
3# Initialize the ApifyClient with your Apify API token
4# Replace '<YOUR_API_TOKEN>' with your token.
5client = ApifyClient("<YOUR_API_TOKEN>")
6
7# Prepare the Actor input
8run_input = {
9    "mode": "search",
10    "query": "malaria",
11    "source": "",
12    "isOpenAccess": False,
13    "sortBy": "relevance",
14    "maxItems": 50,
15}
16
17# Run the Actor and wait for it to finish
18run = client.actor("crawlergang/europe-pmc-scraper").call(run_input=run_input)
19
20# Fetch and print Actor results from the run's dataset (if there are any)
21print("💾 Check your data here: https://console.apify.com/storage/datasets/" + run["defaultDatasetId"])
22for item in client.dataset(run["defaultDatasetId"]).iterate_items():
23    print(item)
24
25# 📚 Want to learn more 📖? Go to → https://docs.apify.com/api/client/python/docs/quick-start

Europe PMC Scraper API in Python

The Apify API client for Python is the official library that allows you to use Europe PMC Scraper API in Python, providing convenience functions and automatic retries on errors.

Install the apify-client

$pip install apify-client

Other API clients include:

Europe PMC Scraper API in JavaScript

Europe PMC Scraper API through CLI

Europe PMC Scraper OpenAPI definition

Europe PMC Scraper API

Europe PMC Scraper

crawlerbros/europe-pmc-scraper

Crawler Bros

Europe PMC Biomedical Literature Search

ryanclinton/europe-pmc-search

Search and extract biomedical and life science publications from Europe PMC -- a free, comprehensive repository of over 40 million articles aggregated from PubMed, PubMed Central (PMC), and preprint servers including bioRxiv and medRxiv.

Ryan Clinton

Europe PMC Scientific Literature Scraper

parseforge/europe-pmc-scraper

Query Europe PMC with the full TITLE, AUTH, JOURNAL, and DOI syntax. Returns PMID, DOI, title, authors, abstract, journal, publication year, citation count, open access flag, and source. Useful for systematic reviews, literature mining, and biomedical research workflows.

ParseForge

Europe PMC Literature Scraper

parseforge/europepmc-scraper

Scrape Europe PMC for biomedical research papers. Search by title, author, MeSH terms, journal. Get DOI, abstract, full-text URLs, citations, references, open-access status. No API key required.

ParseForge

Europe PMC Articles Scraper

parseforge/europe-pmc-articles-scraper

Search Europe PMC across millions of life sciences articles with any free text query. Returns PMID, PMCID, DOI, title, authors, journal, year, and abstract snippet. Useful for systematic reviews, citation harvesting, drug target evidence collection, and literature monitoring.

ParseForge

PubMed Scraper - Biomedical Literature & Citations

benthepythondev/pubmed-scraper

PubMed Scraper for the official NCBI PubMed API. Search 37M+ biomedical citations; extract title, authors, journal, publication date, DOI, PMID, article type and links. Supports PubMed field tags and sorting. For systematic reviews, medical research and bibliometrics. Keyless and fast.

ben

PubMed Research Article Scraper

taroyamada/pubmed-research-intelligence

Search PubMed with official NCBI E-utilities and export article, author, journal, PMID, DOI, publication type, and biomedical topic rows.

naoki anzai

PubMed Scraper

lulzasaur/pubmed-scraper

Search and scrape PubMed biomedical literature via NCBI E-utilities. Get titles, authors, abstracts, journals, MeSH terms, DOIs. Search by keyword or fetch by PMID.

lulz bot

Pmc Profile Scraper

getdataforme/pmc-profile-scraper

This Apify actor efficiently scrapes PubMed Central articles to extract titles, full content, authors, and keywords, providing structured JSON data for researchers and analysts....

GetDataForMe

Pubmed Citation Scraper

parseforge/pubmed-citation-scraper

Automate collection of detailed citation information from the world's largest biomedical literature database. Extract complete citation data including titles, authors, abstracts, publication dates, journals, DOIs, MeSH terms, and more from NCBI's PubMed database.

ParseForge

5.0