GA4GH TRS Tool Registry Extractor
Pricing
from $0.35 / 1,000 tool rows
Point at ANY GA4GH TRS v2 registry (Dockstore, WorkflowHub) and pull tools, workflows, tool classes, versions and CWL/WDL/NFL/GALAXY descriptors into clean flat rows. Auto-pages via next_page, round-trips %2F tool ids, surfaces each version's descriptor types. Pay per tool.
You can access the GA4GH TRS Tool Registry Extractor programmatically from your own applications by using the Apify API. You can also choose the language preference from below. To use the Apify API, you’ll need an Apify account and your API token, found in Integrations settings in Apify Console.
1import { ApifyClient } from 'apify-client';2
3// Initialize the ApifyClient with your Apify API token4// Replace the '<YOUR_API_TOKEN>' with your token5const client = new ApifyClient({6 token: '<YOUR_API_TOKEN>',7});8
9// Prepare Actor input10const input = {11 "sources": [12 "https://dockstore.org/api/ga4gh/trs/v2"13 ],14 "maxRecords": 100015};16
17// Run the Actor and wait for it to finish18const run = await client.actor("datamule/ga4gh-trs-tool-registry-extractor").call(input);19
20// Fetch and print Actor results from the run's dataset (if any)21console.log('Results from dataset');22console.log(`💾 Check your data here: https://console.apify.com/storage/datasets/${run.defaultDatasetId}`);23const { items } = await client.dataset(run.defaultDatasetId).listItems();24items.forEach((item) => {25 console.dir(item);26});27
28// 📚 Want to learn more 📖? Go to → https://docs.apify.com/api/client/js/docsThe Apify API client for JavaScript is the official library that allows you to use GA4GH TRS Tool Registry Extractor API in JavaScript or TypeScript, providing convenience functions and automatic retries on errors.
Install the apify-client
$npm install apify-clientOther API clients include: