You can access the ChEMBL Compounds Scraper programmatically from your own applications by using the Apify API. You can also choose the language preference from below. To use the Apify API, you’ll need an Apify account and your API token, found in API & Integrations in Apify Console.

Python

JavaScript

CLI

OpenAPI

HTTP

MCP

1from apify_client import ApifyClient
2
3# Initialize the ApifyClient with your Apify API token
4# Replace '<YOUR_API_TOKEN>' with your token.
5client = ApifyClient("<YOUR_API_TOKEN>")
6
7# Prepare the Actor input
8run_input = { "maxItems": 10 }
9
10# Run the Actor and wait for it to finish
11run = client.actor("parseforge/chembl-compounds-scraper").call(run_input=run_input)
12
13# Fetch and print Actor results from the run's dataset (if there are any)
14print(f"💾 Check your data here: https://console.apify.com/storage/datasets/{run.default_dataset_id}")
15for item in client.dataset(run.default_dataset_id).iterate_items():
16    print(item)
17
18# 📚 Want to learn more 📖? Go to → https://docs.apify.com/api/client/python/docs/quick-start

ChEMBL Scraper - Compounds, SMILES & Clinical Phase Data API API in Python

The Apify API client for Python is the official library that allows you to use ChEMBL Compounds Scraper API in Python, providing convenience functions and automatic retries on errors.

Install the apify-client

$pip install apify-client

Other API clients include:

ChEMBL Compounds Scraper API in JavaScript

ChEMBL Compounds Scraper API through CLI

ChEMBL Compounds Scraper OpenAPI definition

ChEMBL Compounds Scraper API

ChEMBL Molecules Scraper

parseforge/chembl-molecules-scraper

Scrapes ChEMBL molecules by name substring, ChEMBL ID, or molecule type. Returns each molecule as a flat row with metadata. Export to CSV, JSON, Excel, or XML.

ParseForge

ChEMBL Molecules Scraper - Compound Metadata

benthepythondev/chembl-molecules-scraper

Search ChEMBL molecules and export compound IDs, names, molecule type, development phase, formula, weight, ALogP, SMILES and links.

Ben

ChEMBL Targets Scraper

parseforge/chembl-targets-scraper

Scrapes ChEMBL target records by search term, ChEMBL ID, organism, or target type. Returns each target as a flat row with ID, name, organism, and type.

ParseForge

ChEMBL Drug & Molecule Scraper - Free Chemistry API

ninhothedev/chembl-scraper

$0.5/1K 🔥 ChEMBL scraper! Drugs & bioactive molecules — formula, weight, phase, SMILES & InChI. No key. JSON, CSV, Excel or API in seconds. Accelerate drug discovery & cheminformatics ⚡

ninhothedev

ChEMBL Assays Scraper

parseforge/chembl-assays-scraper

Scrapes ChEMBL assay records by target ChEMBL ID, assay type, organism, keyword search, or direct assay ID. Returns each assay as a flat row with description, target, confidence score, and metadata.

ParseForge

ChEMBL Bioactivity Normalizer & QC

flintglade/chembl-bioactivity-normalizer-qc

Normalize public ChEMBL bioactivity records into deterministic, analysis-ready rows with units, pChEMBL values, provenance, and explicit QC flags. Submit activity IDs or a bounded query; malformed and ambiguous records are uncharged.

Flintglade

EU Clinical Trials EMA CTIS Scraper

parseforge/euctr-ema-trials-scraper

Scrapes EU clinical trials from the EMA CTIS register by search term, status, or phase. Returns each trial as a flat row with title, sponsor, condition, status, and phase.

ParseForge

ClinicalTrials.gov Scraper: Studies, Sponsors, Phase

thoob/clinical-trials-feed

Clean, flat clinical-trial records from the official ClinicalTrials.gov v2 API, filtered by condition, sponsor, status, phase, and country, with a what-changed-since-last-run mode. Billed only per delivered record.

Pono Data

ClinicalTrials.gov Scraper

foo121/clinical-trials-scraper

Export clinical trials by condition, status and phase from ClinicalTrials.gov: NCT ID, title, sponsor, phase, enrollment, locations, interventions, dates. For pharma, CRO and research. Pay per result.

ziv shay

Clinicaltrials Scraper

fortuitous_pirate/clinicaltrials-scraper

Extract clinical trial data from ClinicalTrials.gov. Search active, recruiting, and completed studies by condition, drug/intervention, sponsor, or phase. Returns trial ID, status, phase, enrollment, start date, eligibility criteria, and locations. Free API — no authentication required.