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NCBI dbSNP Variant Scraper

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from $7.50 / 1,000 results

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NCBI dbSNP Variant Scraper

NCBI dbSNP Variant Scraper

Search NCBI dbSNP for short genetic variants by gene symbol or rs ID. Returns rs accession, chromosome position, allele info, gene context, and global minor allele frequencies. Useful for GWAS pipelines, variant annotation, population genetics, and pharmacogenomics work.

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from $7.50 / 1,000 results

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ParseForge

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๐Ÿ”ฌ dbSNP Esummary Scraper

๐Ÿš€ Export NCBI dbSNP data in seconds. Structured records ready for spreadsheet, database, and BI tooling.

The dbSNP Esummary Scraper turns the public NCBI dbSNP endpoint into a clean, structured dataset. It calls the upstream API, parses the response, and flattens each record into one row, ready for downstream tooling.

๐ŸŽฏ Target Audience๐Ÿ’ก Primary Use Cases
๐Ÿ“Š Analysts and researchersBuild clean datasets from public NCBI dbSNP data.
๐Ÿข Operations teamsMonitor key indicators on a schedule.
๐Ÿค– ML engineersConstruct training and evaluation sets.
๐Ÿ“ฐ JournalistsVerify figures and pull sources with one click.
๐Ÿ‘ฉโ€๐Ÿ’ป DevelopersMirror upstream data into your warehouse without writing client code.

๐Ÿ“‹ What the dbSNP Esummary Scraper does

  • Calls the public NCBI dbSNP endpoint with the filters you supply.
  • Parses the response and normalizes each record.
  • Casts numeric fields where possible so the data drops cleanly into BI tools.
  • Surfaces upstream errors and rate limits as a single record with the error field set.
  • Exports to any downstream format supported by Apify.

๐Ÿ’ก Why it matters. Public data is great, but raw API responses rarely map cleanly to a spreadsheet. This actor handles the plumbing so you can focus on analysis.

๐Ÿ“Š Data fields

Each record includes: alleles, chr, function, gene, maf, organism, position, results, scrapedAt, snp_class, snp_id, validated. These field names come straight from the actor's dataset schema, so what you see here is what lands in your dataset.

โš ๏ธ Good to Know. This actor talks to the public NCBI dbSNP endpoint. Upstream rate limits and availability apply.

๐Ÿš€ How to use

  1. Click Try for free.
  2. Adjust the filters or leave defaults.
  3. Click Start. Within seconds, your dataset is ready.
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Disclaimer. This actor scrapes only publicly available data. ParseForge is not affiliated with, endorsed by, or sponsored by any of the third-party services referenced. Users are responsible for complying with the target site's terms of service and applicable law. Create a free account w/ $5 credit.

๐Ÿ†˜ Need Help?

If you hit a bug, have questions about setup, or need a scraper we haven't built yet, open our contact form or write to parseforge@protonmail.com. We also take on paid custom data projects.

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