PubMed Article Metadata Scraper avatar

PubMed Article Metadata Scraper

Pricing

from $3.62 / 1,000 results

Go to Apify Store
PubMed Article Metadata Scraper

PubMed Article Metadata Scraper

Pricing

from $3.62 / 1,000 results

Rating

0.0

(0)

Developer

ParseForge

ParseForge

Maintained by Community

Actor stats

0

Bookmarked

2

Total users

1

Monthly active users

2 days ago

Last modified

Categories

Share

ParseForge Banner

πŸ”¬ PubMed Article Metadata Scraper

πŸš€ Search PubMed and export clean, structured article metadata in seconds.

This Actor runs any PubMed query and returns structured metadata for each matching article, straight from the official NCBI E-utilities API. No login, no API key, no HTML scraping.

PubMed indexes more than 36 million biomedical citations. This scraper turns any search into a tidy dataset you can filter, cite, and analyse.

ForUse it to
Researchers & cliniciansBuild reference lists, track a topic, screen literature
Bibliometrics & data teamsAnalyse authorship, journals, and publication trends
DevelopersEnrich records with PMIDs, DOIs, and PMCIDs

πŸ“‹ What it does

  • Runs any PubMed query (same syntax as the PubMed website, including field tags and MeSH terms).
  • Returns one row per article with authors, journal, dates, identifiers, and more.
  • Paginates automatically up to your maxItems, respecting NCBI request limits.

πŸ’‘ Why it matters: it reads the same E-utilities API the NIH exposes for programmatic access, so results are complete and stable, not screen-scraped.

πŸ“Š Output

FieldDescription
πŸ†” pmidPubMed identifier
πŸ”— urlPubMed article URL
πŸ“• titleArticle title
πŸ‘₯ authorsAll author names
✍️ firstAuthor / lastAuthorFirst and last authors
πŸ“° journal / journalAbbrevJournal name and abbreviation
πŸ“… pubDatePublication date
πŸ”’ volume / issue / pagesCitation details
πŸ”— doiDigital Object Identifier
πŸ“„ pmcidPubMed Central id (if available)
#️⃣ issnJournal ISSN
🏷️ publicationTypesArticle types (e.g. Review, Clinical Trial)
πŸ•“ scrapedAtWhen this row was collected

Sample record:

{
"pmid": "42633444",
"url": "https://pubmed.ncbi.nlm.nih.gov/42633444/",
"title": "Increased Junctional Zone Stiffness in Adenomyosis-Associated Infertility",
"authors": ["Wang X", "Deng S", "Pan X"],
"journal": "International journal of women's health",
"pubDate": "2026",
"doi": "10.2147/IJWH.S616756",
"pmcid": "PMC13499567"
}

πŸš€ How to use

  1. Create a free account w/ $5 credit.
  2. Open the Actor, set a query and maxItems.
  3. Run it and download the dataset as JSON, CSV, Excel, or XML.

❓ FAQ

Do I need an API key? No. The Actor uses the public NCBI E-utilities API.

What query syntax is supported? Exactly what pubmed.ncbi.nlm.nih.gov accepts, including field tags like [au], [dp], and MeSH terms.

How many articles can I get? As many as your query matches, up to maxItems. Large runs are paginated automatically.

How fresh is the data? Every run queries PubMed live.

πŸ’‘ Pro Tip: browse the complete ParseForge collection for more research and data Actors.


This Actor is not affiliated with the NIH, NLM, or NCBI. It reads publicly available data from the NCBI E-utilities API for research and analysis. Follow NCBI's usage guidelines.