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from $2.00 / 1,000 results

Reactome Pathways Scraper

Scrapes Reactome pathway records by search term, stable ID, or species, and returns each record as a flat row with stable ID, name, type, and species.

Pricing

from $2.00 / 1,000 results

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0.0

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ParseForge

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8 days ago

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Reactome Pathways Scraper - Search, Stable ID & Species Data API through CLI

The Apify CLI is the official tool that allows you to use Reactome Pathways Scraper locally, providing convenience functions and automatic retries on errors.

Install Apify CLI

Using installation script (macOS/Linux):

$curl -fsSL https://apify.com/install-cli.sh | bash

Using installation script (Windows):

$irm https://apify.com/install-cli.ps1 | iex

Using Homebrew:

$brew install apify-cli

Using npm:

$npm install -g apify-cli

Other API clients include:

Reactome Pathways Scraper API in Python

Reactome Pathways Scraper API in JavaScript

Reactome Pathways Scraper OpenAPI definition

Reactome Pathways Scraper API

Reactome Pathways Scraper

benthepythondev/reactome-pathways-scraper

Collect Reactome records and export id, name, type, dbid, stid, disease as structured JSON, CSV or Excel data.

Ben

Gbif Species Scraper

fortuitous_pirate/gbif-species-scraper

Fetches species occurrence records and taxonomy from GBIF (Global Biodiversity Information Facility). Search by species name, country, or coordinates. 2.5B+ records.

Fortuitous Pirate

GBIF Species Taxonomy Scraper

parseforge/gbif-species-scraper

Scrapes GBIF species search by scientific name, keyword, or taxonomic rank. Returns each record as a flat row with the accepted name, taxonomic key, and rank.

ParseForge

Ensembl Genomics Scraper

parseforge/ensembl-genomics-scraper

Scrapes Ensembl gene annotations, variant consequences, and DNA sequences by symbol, stable ID, region, or rsID. Returns each record as a flat row for 20 reference species.

ParseForge

KEGG Pathways Scraper

parseforge/kegg-pathways-scraper

Scrapes KEGG pathways, modules, and orthology entries by list, keyword search, or specific ID. Returns each entry as a flat row with genes, compounds, and reactions.

ParseForge

Gbif Species Search List2 Scraper

benthepythondev/gbif-species-search-list2-scraper

Collect GBIF species records and export key, rank, class, genus, order, family as structured JSON, CSV or Excel data.

Ben

Gbif Species Search Scraper

benthepythondev/gbif-species-search-scraper

Collect GBIF species search records and export key, rank, class, genus, order, nubkey as structured JSON, CSV or Excel data.

Ben

iNaturalist Species & Observations Scraper

crawlerbros/inaturalist-species-observations

Scrape iNaturalist - the world's largest nature observation platform with 200M+ wildlife sightings. Search observations by species name, browse taxa, filter by location and date, find common species in a region. Completely free, no API key required.

Crawler Bros

4.0

GBIF Species Occurrence Scraper — Biodiversity Records

devilscrapes/gbif-species-occurrence-scraper

Search GBIF's 3B+ record global biodiversity index by species name, country, year, or dataset and export clean rows — full taxonomy, event date, coordinates, basis of record, and dataset provenance — as JSON, CSV, or Excel.

DevilScrapes

GBIF Scraper

crawlerbros/gbif-scraper

Scrape GBIF (Global Biodiversity Information Facility), 2.7B+ biodiversity occurrence records and 10M+ species. Search species taxonomy, browse occurrence records, explore contributing datasets, or fetch species details with vernacular names.

Crawler Bros