Pricing

from $3.00 / 1,000 dataset results

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GEO Dataset Finder

Try for free

Search NCBI Gene Expression Omnibus (GEO) via official E-utilities. Returns series/sample metadata, accessions, and GEO page links only — no CEL/FASTQ or raw file download.

Pricing

from $3.00 / 1,000 dataset results

Rating

0.0

(0)

Developer

runze1 liu

Actor stats

Bookmarked

Total users

Monthly active users

3 days ago

Last modified

Categories

Developer tools

Security

You can access the GEO Dataset Finder programmatically from your own applications by using the Apify API. You can also choose the language preference from below. To use the Apify API, you’ll need an Apify account and your API token, found in API & Integrations in Apify Console.

Python

JavaScript

CLI

OpenAPI

HTTP

MCP

1from apify_client import ApifyClient
2
3# Initialize the ApifyClient with your Apify API token
4# Replace '<YOUR_API_TOKEN>' with your token.
5client = ApifyClient("<YOUR_API_TOKEN>")
6
7# Prepare the Actor input
8run_input = {
9    "query": "lung adenocarcinoma",
10    "organism": "Homo sapiens",
11}
12
13# Run the Actor and wait for it to finish
14run = client.actor("shayuyuyuyu/geo-dataset-finder").call(run_input=run_input)
15
16# Fetch and print Actor results from the run's dataset (if there are any)
17print(f"💾 Check your data here: https://console.apify.com/storage/datasets/{run.default_dataset_id}")
18for item in client.dataset(run.default_dataset_id).iterate_items():
19    print(item)
20
21# 📚 Want to learn more 📖? Go to → https://docs.apify.com/api/client/python/docs/quick-start

GEO Dataset Finder API in Python

The Apify API client for Python is the official library that allows you to use GEO Dataset Finder API in Python, providing convenience functions and automatic retries on errors.

Install the apify-client

$pip install apify-client

Other API clients include:

GEO Dataset Finder API in JavaScript

GEO Dataset Finder API through CLI

GEO Dataset Finder OpenAPI definition

GEO Dataset Finder API

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