PubMed & Europe PMC to Markdown (abstracts + OA full text)

Thesis Literature Review Scraper

leafy-dev-jr/thesis-literature-review-scraper

Turn any research topic into a clean reading list of peer-reviewed papers from multiple data sources in one run. Includes citation-manager exports, spreadsheets, and an LLM-ready Markdown bundle for contextualizing AI queries with real academic literature.

Re-check caller-owned PubMed IDs via Europe PMC for title, publication status, citations, open-access flag and revision-date changes. Metadata only — abstracts are not billed as full text. You only pay for successful checks you receive.

Research Scraper

vexmeavf/research-scraper

One actor, 8 science databases: PubMed, arXiv, OpenAlex, Crossref, Europe PMC, DOAJ, Zenodo and OSF. Get plain-language summaries, open-access full text, translation to any language, citation counts, BibTeX/RIS and ISO-standardized output ready for RAG/LLM.

Crossref Academic Paper Search

ryanclinton/crossref-paper-search

Search over 150 million scholarly works indexed by Crossref -- the largest open registry of DOI metadata in the world. Retrieve structured publication data including titles, authors with ORCID identifiers, citation counts, journal names, funding information, abstracts, and more. No API key required.

Europe PMC Scraper

crawlerbros/europe-pmc-scraper

Scrape Europe PMC, 42M+ biomedical literature records including PubMed, PubMed Central, patents, and preprints. Search publications, get article details by PMID or DOI, and retrieve citation/reference lists.

Europe PMC Scraper - Papers, Abstracts & Citations

logiover/europepmc-literature-scraper

Scrape Europe PMC biomedical literature in bulk. Extract title, authors, affiliation, journal, DOI, PMID, PMCID, abstract, MeSH terms, keywords, citation counts and open-access status to CSV/JSON. No API key, no login.

PubMed API - Research Paper Scraper via Europe PMC Search

captainhandsome/europe-pmc-paper-search

Search Europe PMC and PubMed for research papers by topic, author, journal and year. A scientific literature API that filters for open access or abstract-bearing papers and exports PMIDs, DOIs, abstracts, citation counts and full-text links as a structured dataset.

Medical Conference Proceedings — Abstract Mining API

azureblue/medical-conference-scraper

Search medical conference proceedings via Europe PMC. Returns title, authors, conference, abstract, DOI and publication date.

Europe PMC Scraper — Life-Science Papers & Full Text

hipersoft/europepmc-scraper

Bulk-scrape life-science and biomedical literature from Europe PMC (40M+ records: PubMed, PMC, preprints, patents): title, abstract, authors, journal, year, DOI, PMID/PMCID, citation count, MeSH terms, open-access flag and full-text/PDF links. Thousands per run. No setup.

Europe PMC Scraper

scrapyx/europepmc-scraper

Search Europe PMC, the superset of PubMed: 43M+ abstracts, 10M+ open-access full-text articles, preprints (bioRxiv/medRxiv), patents and theses. Lucene query plus filters, cursor pagination with no ceiling, lookup by PMID/PMCID/DOI, citation networks, text-mined annotations. Keyless.

Europe PMC — Biomedical Knowledge Graph & Literature Mining

ryanclinton/europe-pmc-search

Turn a biomedical topic into a knowledge graph and evidence corpus from Europe PMC. Mines genes, diseases, chemicals, organisms and deposited datasets (GEO, ENA, PDB) from full text, builds entity co-occurrence networks, tracks emerging entities, and exports Neo4j/Gephi CSV. No API key.