Pricing

from $0.53 / 1,000 literature records

PubMed Scraper for RAG: Papers as Chunked JSON

Scrape PubMed citations by search term, MeSH, and article type. Returns RAG-ready JSON with full-text chunks from PMC Open Access (cl100k_base, 512/50) and abstract fallback. Drop-in for LangChain, LlamaIndex, Qdrant, Pinecone, Weaviate, pgvector. Skip GROBID / Pubmed Parser.

Pricing

from $0.53 / 1,000 literature records

Rating

0.0

(0)

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GetAScraper

Actor stats

Bookmarked

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Monthly active users

2 days ago

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You can access the PubMed Scraper for RAG: Papers as Chunked JSON programmatically from your own applications by using the Apify API. You can also choose the language preference from below. To use the Apify API, you’ll need an Apify account and your API token, found in Integrations settings in Apify Console.

Python

JavaScript

CLI

OpenAPI

HTTP

MCP

1import { ApifyClient } from 'apify-client';
2
3// Initialize the ApifyClient with your Apify API token
4// Replace the '<YOUR_API_TOKEN>' with your token
5const client = new ApifyClient({
6    token: '<YOUR_API_TOKEN>',
7});
8
9// Prepare Actor input
10const input = {
11    "searchTerm": "SARS-CoV-2 vaccines",
12    "meshTerms": [],
13    "articleTypes": [],
14    "dateFrom": "2024-01-01",
15    "dateTo": "2024-01-15",
16    "maxPapers": 50
17};
18
19// Run the Actor and wait for it to finish
20const run = await client.actor("getascraper/pubmed-rag-extractor").call(input);
21
22// Fetch and print Actor results from the run's dataset (if any)
23console.log('Results from dataset');
24console.log(`💾 Check your data here: https://console.apify.com/storage/datasets/${run.defaultDatasetId}`);
25const { items } = await client.dataset(run.defaultDatasetId).listItems();
26items.forEach((item) => {
27    console.dir(item);
28});
29
30// 📚 Want to learn more 📖? Go to → https://docs.apify.com/api/client/js/docs

PubMed Scraper for RAG Pipelines: JSON Chunks API in JavaScript

The Apify API client for JavaScript is the official library that allows you to use PubMed Scraper for RAG: Papers as Chunked JSON API in JavaScript or TypeScript, providing convenience functions and automatic retries on errors.

Install the apify-client

$npm install apify-client

Other API clients include:

PubMed Scraper for RAG: Papers as Chunked JSON API in Python

PubMed Scraper for RAG: Papers as Chunked JSON API through CLI

PubMed Scraper for RAG: Papers as Chunked JSON OpenAPI definition

PubMed Scraper for RAG: Papers as Chunked JSON API

arXiv Scraper for RAG: Papers as Chunked JSON

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PubMed Scraper for the official NCBI PubMed API. Search 37M+ biomedical citations; extract title, authors, journal, publication date, DOI, PMID, article type and links. Supports PubMed field tags and sorting. For systematic reviews, medical research and bibliometrics. Keyless and fast.

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Search PubMed via the official NCBI API and extract article metadata, abstracts, DOI, authors, journals, MeSH terms, and keywords.

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PubMed Data Extractor scrapes PubMed search results by keyword, so you get titles, authors, journals, DOIs, and abstracts as clean, exportable data in seconds.