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from $7.50 / 1,000 results

NCBI ClinVar Variant Scraper

Query NCBI ClinVar for human genetic variants tied to disease. Search by gene symbol, variant ID, or clinical significance and pull variation IDs, gene info, molecular consequence, clinical assertions, and review status. Useful for clinical genomics, variant curation, and research.

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from $7.50 / 1,000 results

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🔬 ClinVar Esummary Scraper

🚀 Export NCBI ClinVar data in seconds. Structured records ready for spreadsheet, database, and BI tooling.

The ClinVar Esummary Scraper turns the public NCBI ClinVar endpoint into a clean, structured dataset. It calls the upstream API, parses the response, and flattens each record into one row, ready for downstream tooling.

🎯 Target Audience	💡 Primary Use Cases
📊 Analysts and researchers	Build clean datasets from public NCBI ClinVar data.
🏢 Operations teams	Monitor key indicators on a schedule.
🤖 ML engineers	Construct training and evaluation sets.
📰 Journalists	Verify figures and pull sources with one click.
👩‍💻 Developers	Mirror upstream data into your warehouse without writing client code.

📋 What the ClinVar Esummary Scraper does

Calls the public NCBI ClinVar endpoint with the filters you supply.
Parses the response and normalizes each record.
Casts numeric fields where possible so the data drops cleanly into BI tools.
Surfaces upstream errors and rate limits as a single record with the error field set.
Exports to any downstream format supported by Apify.

💡 Why it matters. Public data is great, but raw API responses rarely map cleanly to a spreadsheet. This actor handles the plumbing so you can focus on analysis.

📊 Data fields

Each record includes: accession, clinical_significance, condition, gene, hgvs, last_evaluated, results, review_status, scrapedAt, submitters, title, variation_type. These field names come straight from the actor's dataset schema, so what you see here is what lands in your dataset.

⚠️ Good to Know. This actor talks to the public NCBI ClinVar endpoint. Upstream rate limits and availability apply.

🚀 How to use

Click Try for free.
Adjust the filters or leave defaults.
Click Start. Within seconds, your dataset is ready.

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Disclaimer. This actor scrapes only publicly available data. ParseForge is not affiliated with, endorsed by, or sponsored by any of the third-party services referenced. Users are responsible for complying with the target site's terms of service and applicable law. Create a free account w/ $5 credit.

🆘 Need Help?

If you hit a bug, have questions about setup, or need a scraper we haven't built yet, open our contact form or write to parseforge@protonmail.com. We also take on paid custom data projects.

For faster answers, join our Discord. It's the best place to get support and suggest new actors.

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