Pricing

from $7.50 / 1,000 results

NCBI EUtils Gene Summary Scraper

Pull gene summaries from NCBI EUtils by Gene UID, returning official symbol, full name, aliases, organism, chromosome, map location, and description. Useful for annotating variant lists, building gene knowledge panels, and enriching bioinformatics dashboards with canonical NCBI metadata.

Pricing

from $7.50 / 1,000 results

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ParseForge

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Monthly active users

2 days ago

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Automation

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Education

You can access the NCBI EUtils Gene Summary Scraper programmatically from your own applications by using the Apify API. You can also choose the language preference from below. To use the Apify API, you’ll need an Apify account and your API token, found in Integrations settings in Apify Console.

Python

JavaScript

CLI

OpenAPI

HTTP

MCP

1from apify_client import ApifyClient
2
3# Initialize the ApifyClient with your Apify API token
4# Replace '<YOUR_API_TOKEN>' with your token.
5client = ApifyClient("<YOUR_API_TOKEN>")
6
7# Prepare the Actor input
8run_input = {
9    "geneIds": [
10        "672",
11        "7157",
12        "1956",
13        "4609",
14        "3845",
15    ],
16    "maxItems": 10,
17}
18
19# Run the Actor and wait for it to finish
20run = client.actor("parseforge/ncbi-eutils-gene-summary-scraper").call(run_input=run_input)
21
22# Fetch and print Actor results from the run's dataset (if there are any)
23print("💾 Check your data here: https://console.apify.com/storage/datasets/" + run["defaultDatasetId"])
24for item in client.dataset(run["defaultDatasetId"]).iterate_items():
25    print(item)
26
27# 📚 Want to learn more 📖? Go to → https://docs.apify.com/api/client/python/docs/quick-start

NCBI EUtils Gene Summary Scraper API in Python

The Apify API client for Python is the official library that allows you to use NCBI EUtils Gene Summary Scraper API in Python, providing convenience functions and automatic retries on errors.

Install the apify-client

$pip install apify-client

Other API clients include:

NCBI EUtils Gene Summary Scraper API in JavaScript

NCBI EUtils Gene Summary Scraper API through CLI

NCBI EUtils Gene Summary Scraper OpenAPI definition

NCBI EUtils Gene Summary Scraper API

NCBI Gene Database Scraper

parseforge/ncbi-eutils-gene-scraper

Query NCBI Gene through Entrez syntax such as BRCA1[gene] AND human[orgn]. Returns gene symbol, description, organism, chromosome, map location, summary, aliases, and designations. Useful for genomics pipelines, target discovery, and clinical research across model organisms.

ParseForge

Europe PMC Literature Scraper

parseforge/europepmc-scraper

Scrape Europe PMC for biomedical research papers. Search by title, author, MeSH terms, journal. Get DOI, abstract, full-text URLs, citations, references, open-access status. No API key required.

ParseForge

Ensembl Genomics Scraper (Genes, Variants, Sequences)

parseforge/ensembl-genomics-scraper

Query the Ensembl genome reference for 200+ species. Look up genes by symbol or stable ID, list features in a genomic region, fetch DNA sequence, or resolve human variants (rsIDs). Returns biotype, coordinates, transcript IDs, descriptions, and assembly metadata.

ParseForge

NCBI Gene Lookup — Genomics API for Pharma R&D

azureblue/ncbi-gene-scraper

Search NCBI Gene via E-utilities. Returns gene symbol, full name, chromosome location, map locus, aliases, OMIM ID, organism and functional summary.

azureblue

NCBI ClinVar Variants Scraper - Genetic Variation Data

parseforge/ncbi-clinvar-variants-scraper

Sweep medical and biomedical records from Ncbi Clinvar Variants with names, identifiers, classifications, descriptions, status and source links. Ideal for healthcare research, pharma teams and clinical analytics. Run on demand or on a recurring schedule and feed every row into your favourite anal.

ParseForge

HGNC Gene Symbols Scraper

parseforge/hgnc-gene-symbols-scraper

Query the HUGO Gene Nomenclature Committee database for approved human gene symbols, names, aliases, chromosomal location, gene family, RefSeq, Ensembl, OMIM, UniProt, and external links. Export to JSON, CSV, or Excel for bioinformatics, genomics research, and pharmaceutical pipelines.

ParseForge

NCBI dbSNP Variants Scraper

parseforge/ncbi-dbsnp-variants-scraper

Discover medical and biomedical records from Ncbi Dbsnp Variants with names, identifiers, classifications, descriptions, status and source links. Ideal for healthcare research, pharma teams and clinical analytics. Run on demand or on a recurring schedule and feed every row into your favourite ana.

ParseForge

PubMed Biomedical Paper Scraper

brilliant_gum/pubmed-scraper

Scrapes PubMed biomedical papers using the official NCBI Entrez API. Extracts full metadata including abstracts, MeSH terms, authors with affiliations, citations, grants, and more. Includes smart analytics for author networks, topic trends, and geographic distribution.

Yuliia Kulakova

PubMed Scraper

labrat011/pubmed-scraper

Search 35M+ medical citations from PubMed/MEDLINE. Extract articles, abstracts, authors, MeSH terms, and citations for research, competitive intelligence, or AI/RAG pipelines. No API key required.

mick_

Clinical Trial Multi-Source Aggregator

parseforge/clinical-trial-multi-source-scraper

Search active and historical clinical trials across the EU CTIS, WHO, openFDA and ClinVar variants in one query. Pull trial IDs, sponsors, phases, conditions, locations, status and outcome data. Built for pharma research, patient navigators and biotech analysts.

ParseForge