NCBI Gene Summary Scraper

NCBI Gene Database Scraper

parseforge/ncbi-eutils-gene-scraper

Scrapes NCBI Gene records by Entrez query and returns each gene as a flat row with identifier, symbol, name, location, aliases, OMIM ID, organism, and functional summary.

NCBI Gene Records Scraper

benthepythondev/ncbi-gene-records-scraper

Collect NCBI Gene records and export gene id, query, source, scraped at as structured JSON, CSV or Excel data.

NCBI Gene Lookup — Genomics API for Pharma R&D

azureblue/ncbi-gene-scraper

Search NCBI Gene via E-utilities. Returns gene symbol, full name, chromosome location, map locus, aliases, OMIM ID, organism and functional summary.

Ensembl Gene Scraper - Gene IDs, Biotype & Location

ninhothedev/ensembl-scraper

$0.5/1K 🔥 Ensembl gene scraper! Gene IDs, biotype, chromosome location & description across species. No key. JSON, CSV, Excel or API in seconds. Power genomics pipelines ⚡

Query NCBI databases (PubMed, Gene, Protein, SNPs) via the E-utilities API. Search biomedical literature, gene sequences, protein data, and genetic variants — no API key required.

GTEx Gene Expression Scraper

parseforge/gtex-gene-expression-scraper

Collects median gene expression values from the GTEx portal for one or more HGNC gene symbols. Returns a row per tissue with TPM, read count, and sample size.

GTEx eQTL Scraper

parseforge/gtex-eqtl-scraper

Collects GTEx eQTL associations by Gencode gene ID and tissue site, returning each variant-gene pair as a flat row with p-value, normalized effect size, and gene symbol.

Pharma / Biotech Pack — FDA, ClinicalTrials, Genetics

cynix_dev/pharma-biotech-pack

Map a therapeutic area, compound, or gene in one pull — pulling from the official US government and open biomedical APIs: FDA drug labels (openFDA), ClinicalTrials.gov studies, and MedlinePlus / NCBI Gene summaries.

NCBI dbSNP Variant Scraper

parseforge/dbsnp-esummary-scraper

Scrapes variant summary records from NCBI dbSNP for a given search term and returns each variant as a flat row with clinical significance, allele frequencies, gene mappings, and PubMed IDs.

NCBI ClinVar Variants Scraper

parseforge/ncbi-clinvar-variants-scraper

Scrapes NCBI ClinVar for genetic variant records by gene, condition, or free-text query. Returns each variant as a flat row with clinical significance, review status, and associated conditions.