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STRING Protein Interactions Scraper

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STRING Protein Interactions Scraper

STRING Protein Interactions Scraper

Pull protein interaction networks from STRING DB by passing one or more protein identifiers and an NCBI taxon ID. Returns interacting partner names, STRING IDs, combined confidence scores, and evidence channel subscores. Useful for systems biology, target discovery, and pathway analysis.

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from $7.50 / 1,000 results

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ParseForge

ParseForge

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๐Ÿ”ฌ STRING Protein Interactions Scraper

๐Ÿš€ Export STRING DB data in seconds. Structured records ready for spreadsheet, database, and BI tooling.

The STRING Protein Interactions Scraper turns the public STRING DB endpoint into a clean, structured dataset. It calls the upstream API, parses the response, and flattens each record into one row, ready for downstream tooling.

๐ŸŽฏ Target Audience๐Ÿ’ก Primary Use Cases
๐Ÿ“Š Analysts and researchersBuild clean datasets from public STRING DB data.
๐Ÿข Operations teamsMonitor key indicators on a schedule.
๐Ÿค– ML engineersConstruct training and evaluation sets.
๐Ÿ“ฐ JournalistsVerify figures and pull sources with one click.
๐Ÿ‘ฉโ€๐Ÿ’ป DevelopersMirror upstream data into your warehouse without writing client code.

๐Ÿ“‹ What the STRING Protein Interactions Scraper does

  • Calls the public STRING DB endpoint with the filters you supply.
  • Parses the response and normalizes each record.
  • Casts numeric fields where possible so the data drops cleanly into BI tools.
  • Surfaces upstream errors and rate limits as a single record with the error field set.
  • Exports to any downstream format supported by Apify.

๐Ÿ’ก Why it matters. Public data is great, but raw API responses rarely map cleanly to a spreadsheet. This actor handles the plumbing so you can focus on analysis.

๐Ÿ“Š Data fields

Each record includes: coexpression, cooccurence, database, experimental, fusion, neighborhood, protein_a, protein_b, results, score, scrapedAt, textmining. These field names come straight from the actor's dataset schema, so what you see here is what lands in your dataset.

โš ๏ธ Good to Know. This actor talks to the public STRING DB endpoint. Upstream rate limits and availability apply.

๐Ÿš€ How to use

  1. Click Try for free.
  2. Adjust the filters or leave defaults.
  3. Click Start. Within seconds, your dataset is ready.
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Disclaimer. This actor scrapes only publicly available data. ParseForge is not affiliated with, endorsed by, or sponsored by any of the third-party services referenced. Users are responsible for complying with the target site's terms of service and applicable law. Create a free account w/ $5 credit.

๐Ÿ†˜ Need Help?

If you hit a bug, have questions about setup, or need a scraper we haven't built yet, open our contact form or write to parseforge@protonmail.com. We also take on paid custom data projects.

For faster answers, join our Discord. It's the best place to get support and suggest new actors.