Pricing

from $28.87 / 1,000 results

RCSB PDB Protein Structure Scraper

Scrapes RCSB PDB protein structure metadata by keyword search or PDB ID list. Returns each structure as a flat row with title, method, resolution, authors, release date, and entity counts.

Pricing

from $28.87 / 1,000 results

Rating

0.0

(0)

Developer

ParseForge

Actor stats

Bookmarked

Total users

Monthly active users

17 days ago

Last modified

Categories

Education

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You can access the RCSB PDB Protein Structure Scraper programmatically from your own applications by using the Apify API. You can also choose the language preference from below. To use the Apify API, you’ll need an Apify account and your API token, found in API & Integrations in Apify Console.

Python

JavaScript

CLI

OpenAPI

HTTP

MCP

1from apify_client import ApifyClient
2
3# Initialize the ApifyClient with your Apify API token
4# Replace '<YOUR_API_TOKEN>' with your token.
5client = ApifyClient("<YOUR_API_TOKEN>")
6
7# Prepare the Actor input
8run_input = {
9    "searchQuery": "hemoglobin",
10    "pdbIds": [],
11    "maxItems": 10,
12    "experimentalMethod": "",
13}
14
15# Run the Actor and wait for it to finish
16run = client.actor("parseforge/rcsb-pdb-scraper").call(run_input=run_input)
17
18# Fetch and print Actor results from the run's dataset (if there are any)
19print(f"💾 Check your data here: https://console.apify.com/storage/datasets/{run.default_dataset_id}")
20for item in client.dataset(run.default_dataset_id).iterate_items():
21    print(item)
22
23# 📚 Want to learn more 📖? Go to → https://docs.apify.com/api/client/python/docs/quick-start

RCSB PDB Scraper - Protein Structure Metadata & Search API API in Python

The Apify API client for Python is the official library that allows you to use RCSB PDB Protein Structure Scraper API in Python, providing convenience functions and automatic retries on errors.

Install the apify-client

$pip install apify-client

Other API clients include:

RCSB PDB Protein Structure Scraper API in JavaScript

RCSB PDB Protein Structure Scraper API through CLI

RCSB PDB Protein Structure Scraper OpenAPI definition

RCSB PDB Protein Structure Scraper API

RCSB PDB Structures Scraper - Protein Data

benthepythondev/rcsb-pdb-structures-scraper

Look up RCSB PDB structures and export titles, methods, resolution, entity counts, dates, authors and canonical structure links.

Ben

Protein Structure Release Monitor

flintglade/protein-structure-release-monitor

Monitor protein structure releases and revisions across RCSB PDB, PDBe, AlphaFold DB, and UniProt with durable baselines and evidence-backed diffs.

Flintglade

Protein Structure Evidence Resolver

flintglade/protein-structure-evidence-resolver

Resolve protein structure evidence across RCSB PDB, PDBe, AlphaFold DB, and UniProt with source provenance, conflicts, and downloadable artifacts.

Flintglade

Rcsb Protein Scraper

velvety_bedbug/rcsb-protein-scraper

RCSB Protein Data Bank Scraper. Structured data export for lead generation, enrichment, and competitive research.

Peters Bugs

UniProt Protein Scraper

parseforge/uniprot-protein-scraper

Scrapes UniProt protein entries from a search query and returns each one as a flat row with accession, protein name, gene, organism, function, and sequence. No API key required.

ParseForge

STRING Protein Interactions Scraper

parseforge/string-protein-interactions-scraper

Collects protein-protein interactions from the STRING database for a given list of identifiers and an NCBI taxon ID, returning each interaction as a flat row with combined and evidence scores.

ParseForge

EBI Proteins API Scraper

parseforge/ebi-proteins-api-scraper

Collects protein metadata from the EBI Proteins API by protein name, organism, or both. Returns each protein as a flat row with accession, function annotations, and cross-references.

ParseForge

STRING Protein-Protein Interactions Scraper

ninhothedev/string-interactions-scraper

$0.5/1K 🔥 STRING PPI Network! Map protein-protein interactions with confidence scores & partners. No key. JSON, CSV, Excel or API in seconds. Build interactomes for systems-biology studies ⚡

ninhothedev

UniProt Proteins Scraper

parseforge/uniprot-proteins-scraper

Scrapes UniProt protein entries by search query and returns each protein as a flat row with accession, names, gene, organism, sequence, and annotations.

ParseForge

PDBe Protein Structure Annotations Scraper

ninhothedev/pdbe-structures-scraper

$0.5/1K 🔥 PDBe Structures Scraper! Retrieve protein 3D structures, titles, resolution, authors & experimental data from PDBe. No key. JSON, CSV, Excel or API in seconds. Feed a structural-biology or drug-discovery pipeline ⚡

ninhothedev